Data Repository
#datarepository
Description
This section contains an archive of raw data datasets, supplementary materials and additional files accompanying some of our publications that are not directly downloadable from the publisher’s website.
Filter by publication: select a publication to view its datasets.
Canciani, A., Palamini, M., Forneris, F., J. Struct. Biol. (2026) · 2 items in 1 resource
Dataset
Raw X-ray diffraction Images
Described in Canciani, A., Palamini, M., Forneris, F., J. Struct. Biol. (2026)
- Dataset for PDB ID 9NWG: tgz Archive (7.0 GB)
- Dataset for PDB ID 9NWH: tgz Archive (29.0 GB)
De Marco, Rai, Scietti, et al. Nature Communications (2025) · 7 items in 5 resources
Dataset
Raw X-ray diffraction Images
Described in De Marco, Rai, Scietti, et al. Nature Communications (2025)
- Dataset for PDB ID 9EVJ: tgz Archive (8.1 GB)
- Dataset for PDB ID 9EVK: tgz Archive (23.0 GB)
- Dataset for PDB ID 9EVL: tgz Archive (23.0 GB)
SEC-SAXS
Raw frames from SEC-SAXS runs
Described in De Marco, Rai, Scietti, et al. Nature Communications (2025)
- Dataset for SASBDB ID SASDVZ2: tgz Archive 13.0 MB)
Molecular dynamics
Raw data from MD simulations
Described in De Marco, Rai, Scietti, et al. Nature Communications (2025)
- MD simulation data, including initial coordinate files, simulation input files, and final output coordinate files : Dataset on ZENODO (external download)
Cross-linking MS
Raw data from XL-MS
Described in De Marco, Rai, Scietti, et al. Nature Communications (2025)
- Raw XL-MS dataset for GLT25D1/COLGALT1-LH3/PLOD3 complex: Project PXD061021 on PRIDE (external download)
Native MS
Raw data from Native-MS
Described in De Marco, Rai, Scietti, et al. Nature Communications (2025)
- Raw Native-MS dataset for GLT25D1/COLGALT1: Project MSV000097322 on MASSIVE (external download)
Mattoteia, D., Chiapparino, A., Fumagalli, M., et al. Int. J. Mol. Sci. (2023) · 2 items in 1 resource
Dataset
Raw X-ray diffraction Images
Described in Mattoteia, D., Chiapparino, A., Fumagalli, M., et al. Int. J. Mol. Sci. (2023)
- Dataset for PDB ID 6TEZ: tgz Archive (8.4 GB)
- Dataset for PDB ID 8ONE: tgz Archive (3.1 GB)
Patil, et al. Sci. Signal. (2023) · 8 items in 3 resources
Dataset
Raw X-ray diffraction Images
Described in Patil, et al. Sci. Signal. (2023)
- Dataset for PDB ID 7ZCB: tgz Archive (1.3 GB)
- Dataset for PDB ID 7ZC9: tgz Archive (4.9 GB)
SEC-SAXS
Raw frames from SEC-SAXS runs
Described in Patil, et al. Sci. Signal. (2023)
- Dataset for SASBDB ID SASDN68: tgz Archive (21.0 MB)
- Dataset for SASBDB ID SASDN78: tgz Archive (21.0 MB)
- Dataset for SASBDB ID SASDN88: tgz Archive (21.0 MB)
HDX-MS
Raw data from HDX-MS
Described in Patil, et al. Sci. Signal. (2023)
- Raw HDX dataset 1 for GPR179-Pikachurin EGF3-LG3 complex: 40 files (external download)
- Raw HDX dataset 2 for GPR179-Pikachurin EGF3-LG3 complex: 40 files (external download)
- Raw HDX dataset 3 for GPR179-Pikachurin EGF3-LG3 complex: 34 files (external download)
Guarino, S.R., et al., Acta Cryst F (2022) · 1 item in 1 resource
Dataset
Raw X-ray diffraction Images
Described in Guarino, S.R., et al., Acta Cryst F (2022)
- Dataset for PDB ID 7TNG: tgz Archive (2.9 GB)
Ongaro T., Guarino S.R., et al., J Struct Biol (2021) · 6 items in 3 resources
Dataset
Raw X-ray diffraction Images
Described in Ongaro T., Guarino S.R., et al., J Struct Biol (2021)
- Dataset for PDB ID 7AH1: tgz Archive (1.6 GB)
SEC-SAXS
Raw frames from SEC-SAXS runs
Described in Ongaro T., Guarino S.R., et al., J Struct Biol (2021)
- Dataset for SASBDB ID SASDJN8: tgz Archive (33.0 MB)
- Dataset for SASBDB ID SASDJP8: tgz Archive (22.0 MB)
- Dataset for SASBDB ID SASDJQ8: tgz Archive (23.0 MB)
Negative-stain EM
Raw negative stain EM micrographs, 3D map and PDB model
Described in Ongaro T., Guarino S.R., et al., J Struct Biol (2021)
- Dataset for IL12-L19L19 immunocytokine: tgz Archive (68.0 MB)
- Dataset for L19L19-IL2 immunocytokine: tgz Archive (24.0 MB)
Canciani A., Catucci G., Forneris F., Prot Sci (2019) · 1 item in 1 resource
Dataset
Raw X-ray diffraction Images
Described in Canciani A., Catucci G., Forneris F., Prot Sci (2019)
- Dataset for PDB ID 6H8M: tgz Archive (6.7 GB)
Scietti L. et al, Nature Communications (2018) · 7 items in 2 resources
Dataset
Raw X-ray diffraction Images
Described in Scietti L. et al, Nature Communications (2018)
- Dataset for PDB ID 6FXK: tgz Archive (0.7 GB)
- Dataset for PDB ID 6FXM: tgz Archive (6.5 GB)
- Dataset for PDB ID 6FXR: tgz Archive (7.5 GB)
- Dataset for PDB ID 6FXT: tgz Archive (3.6 GB)
- Dataset for PDB ID 6FXX: tgz Archive (8.0 GB)
- Datasets for PDB ID 6FXY: “Send Request (57 datasets, over 100 GB)”
SEC-SAXS
Raw frames from SEC-SAXS runs
Described in Scietti L. et al, Nature Communications (2018)
- Dataset for SASBDB ID SASDDW4: tgz Archive (27.0 MB)
Falchetto M., Ciossani G., et al., Ins Mol Biol (2018) · 2 items in 2 resources
Dataset
Raw X-ray diffraction Images
Described in Falchetto M., Ciossani G., et al., Ins Mol Biol (2018)
- Dataset for PDB ID 6HHE: tgz Archive (3 GB)
Molecular model
Model of (E,E)-alpha-farnesene bound to CcapOBP22
Described in Falchetto M., Ciossani G., et al., Ins Mol Biol (2018)
Banushi B. et al., Nature Communications (2016) · 1 item in 1 resource
Molecular model
Homology model of the VPS33B-VIPAR complex
Described in Banushi B. et al., Nature Communications (2016)
Scoffone V.C. et al., Scientific Reports (2016) · 1 item in 1 resource
Molecular model
Homology model of B. cenocepacia CepI
Described in Scoffone V.C. et al., Scientific Reports (2016)
Israylova A. et al., PlosOne (2016) · 1 item in 1 resource
Molecular model
Homology model of B. cenocepacia Glutamate Racemase
Described in Israylova A. et al., PlosOne (2016)
Dzurova L. et al., Proteins (2015) · 2 items in 1 resource
Dataset
Raw X-ray diffraction Images
Described in Dzurova L. et al., Proteins (2015)
- Dataset for PDB ID 5AJT: tgz Archive (1.5 GB)
- Dataset for PDB ID 5AJU: tgz Archive (1.3 GB)