LH1 GLU532DEL | ||
SiMPLOD ID This is the unique identifier for this mutation in the SiMPLOD database. Please use this identifier when linking information described in SiMPLOD about this mutation. |
SiMPLOD1-97 | |
Isoenzyme Follow the links to gather information about the LH1 isoenzyme |
Lysyl Hydroxylase 1 (human) - UniProt - Full Info | |
Nucleotide mutation Follow the links to explore annotated information about the significance of the PLOD1 c.1594_1596del mutation |
PLOD1 NM_000302.2:c.1594_1596del - NCBI RefSeq NCBI SNP: rs797044446 NCBI ClinVar: 14367 |
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Mutation type Current information about the clinical implications of the mutation |
Pathogenic | |
LOVD Link to Leiden Open Variation Database (LOVD) |
c.1594_1596del | |
Disease Phenotype Annotated information about disease phenotypes associated to this mutation |
Kyphoscoliotic Ehlers-Danlos Syndrome (Type VIa) Link1 Link2 | |
Clinical Databases Link to clinical databases, including OMIM (Online Mendelian Inheritance in Man), Orphanet, ICD-10 (International Statistical Classification of Diseases and Related Health Problems, rev. 10), MeSH (Medical Subject Headings) |
OMIM: 225400 Orphanet: ORPHA:1900 ICD-10: Q79.6 MeSH: C536198 | |
Evidence at protein level Based on available structural and biochemical information, a statement about the existence of an LH enzyme variant bearing the described mutation is provided |
This variant is EXTREMELY UNLIKELY to be compatible with a folded LH enzyme. The representation shown in the structure viewer is therefore for mere display purposes and does not refer to an actual predicted existing protein product. | References Publications (and associated links) describing the mutation |
Ha et al., 1994 - DOI - PubMed | Notes from publications A curated excerpt with information about the mutation from the publications found above |
Ha et al. identified this mutation in one allele from a patient"s PLOD cDNA with Ehlers-Danlos syndrome type VI (EDS VI). It consists of a triple-nucleotide deletion that would result in the predicted loss of a glutamic acid at residue 532 (Glu532Del). Clinical features and molecular characterization are presented. |
Related Entries A list of related LH/PLOD variants found matching the structural position of the mutation currently visualized |
SiMPLOD1-134: LH1 dupl326-585;TYR455THRFS (Pathogenic) SiMPLOD1-325: LH1 delta491-550 (Pathogenic) | |
Last Update An evaluation of the possible effects/implications of the mutations on the LH1 molecular structure |
2021-06-23 08:38:51 | |
The three-dimensional visualization is currently based on the homology model of full-length, dimeric human LH1 (generated using the crystal structure of full-length human LH3 as template). You may select a different PDB model file to visualize the mutation(s) using the drop-down menu below (page will refresh): |
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